- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : endomembrane trafficking ATG6-stability regulator protein *(TRAF1) & original description: none
Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g07893 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04300 | No alias | TRAF-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g071882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21634 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G060700.1 | Ceric.26G060700 | endomembrane trafficking ATG6-stability regulator... | 0.05 | OrthoFinder output from all 47 species | |
| Cre12.g494000 | No alias | Vesicle trafficking.endomembrane trafficking.PI3-kinase... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15546 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03193 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018133001 | No alias | Vesicle trafficking.endomembrane trafficking.PI3-kinase... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g40520.1 | LOC_Os12g40520 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10347 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g14880.1 | No alias | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17444 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0084.g018228 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08395 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g005430.4.1 | Solyc03g005430 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g089560.4.1 | Solyc09g089560 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003140_P001 | Zm00001e003140 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019653_P002 | Zm00001e019653 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027387_P004 | Zm00001e027387 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032087_P004 | Zm00001e032087 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |