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  5. Ehy_g07881

Ehy_g07881


Description : not classified & original description: none


Gene families : OG0005880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g07881
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Aop_g69062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0017.g014468 No alias not classified & original description: CDS=1-2799 0.04 OrthoFinder output from all 47 species
Cre16.g685200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g40735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01012163001 No alias Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Len_g12180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 773 840
IPR000504 RRM_dom 4 71
IPR000504 RRM_dom 336 406
IPR000504 RRM_dom 661 741
IPR000504 RRM_dom 538 597
No external refs found!