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  5. Adi_g001123

Adi_g001123


Description : component *(S2Lb/SWD2) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0002761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g001123

Target Alias Description ECC score Gene Family Method Actions
Als_g08121 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Dac_g01475 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011307 No alias not classified & original description: CDS=188-952 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 249 292
IPR001680 WD40_repeat 298 323
IPR001680 WD40_repeat 78 105
IPR001680 WD40_repeat 157 192
No external refs found!