1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g000600

Adi_g000600 (NRPB3, RPB35.5A,...)


Aliases : NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A

Description : component *(NRPE3) of RNA polymerase V complex & original description: none


Gene families : OG0005241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005241_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g000600

Target Alias Description ECC score Gene Family Method Actions
Cba_g05100 NRPB3, RPB35.5A,... component *(NRPE3) of RNA polymerase V complex &... 0.04 OrthoFinder output from all 47 species
LOC_Os09g02284.1 NRPB3, RPB35.5A,... subunit 3 of RNA polymerase 0.02 OrthoFinder output from all 47 species
Solyc05g010300.4.1 NRPB3, RPB35.5A,... subunit 3 of RNA polymerase 0.03 OrthoFinder output from all 47 species
Spa_g13173 NRPB3, RPB35.5A,... component *(NRPE3) of RNA polymerase V complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR011263 DNA-dir_RNA_pol_RpoA/D/Rpb3 29 301
IPR011262 DNA-dir_RNA_pol_insert 59 189
No external refs found!