Sacu_v1.1_s3676.g028926 (TOM1, ATTOM1)


Aliases : TOM1, ATTOM1

Description : tobamovirus multiplication replication host factor *(TOM1) & original description: CDS=155-430


Gene families : OG0000961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s3676.g028926
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Adi_g006847 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.02 OrthoFinder output from all 47 species
Ore_g03208 THH1 tobamovirus multiplication replication host factor... 0.04 OrthoFinder output from all 47 species
Smo167621 TOM3 External stimuli response.biotic stress.tobamovirus... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR009457 THH1/TOM1/TOM3_dom 1 141
No external refs found!