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  5. Sacu_v1.1_s3471.g028815

Sacu_v1.1_s3471.g028815


Description : not classified & original description: CDS=84-1640


Gene families : OG0001585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s3471.g028815
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00052440 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G47440 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g03836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G091800.1 Ceric.07G091800 not classified & original description: pacid=50627264... 0.04 OrthoFinder output from all 47 species
Ehy_g15467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g49000.1 LOC_Os07g49000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431486g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_176258g0020 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g08853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000162 No alias not classified & original description: CDS=48-2129 0.03 OrthoFinder output from all 47 species
Solyc01g079580.3.1 Solyc01g079580 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc06g009670.3.1 Solyc06g009670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g22236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001414_P003 Zm00001e001414 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!