Description : splicing factor *(CFM9) & original description: CDS=72-884
Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s3404.g028763 | |
Cluster | HCCA: Cluster_11 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g008013 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g15290 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g11882 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g11388 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g31967 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g18626 | No alias | splicing factor *(CFM9) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032387001 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g20030.1 | LOC_Os06g20030 | Uncharacterized CRM domain-containing protein At3g25440,... | 0.03 | OrthoFinder output from all 47 species | |
Len_g19656 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g27764 | No alias | splicing factor *(CFM9) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001890 | RNA-binding_CRM | 158 | 241 |
No external refs found! |