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  5. Sacu_v1.1_s3244.g028679

Sacu_v1.1_s3244.g028679


Description : not classified & original description: CDS=1-510


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s3244.g028679
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Ala_g36175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32223.t2 Aspi01Gene32223 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g38760.1 LOC_Os08g38760 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g17488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003353 No alias not classified & original description: CDS=1-708 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003360 No alias not classified & original description: CDS=1-639 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003377 No alias not classified & original description: CDS=1-576 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026035 No alias not classified & original description: CDS=1-822 0.06 OrthoFinder output from all 47 species
Sam_g02458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g066040.1.1 Solyc07g066040 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g03874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003437_P001 Zm00001e003437 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e011930_P001 Zm00001e011930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!