Sacu_v1.1_s3064.g028587 (EMB2453, ATPPR5)

Aliases : EMB2453, ATPPR5

Description : not classified & original description: CDS=1-1023

Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s3064.g028587
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00203740	EMB2453, ATPPR5,...	Pentatricopeptide repeat-containing protein At4g39620,...	0.04	OrthoFinder output from all 47 species
AMTR_s00025p00175980	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At5g48730,...	0.03	OrthoFinder output from all 47 species
AT3G53170	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.02	OrthoFinder output from all 47 species
Dcu_g01190	EMB2453, ATPPR5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01028689001	No alias	Pentatricopeptide repeat-containing protein At5g48730,...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	78	116
IPR002885	Pentatricopeptide_repeat	243	300
IPR002885	Pentatricopeptide_repeat	145	195
IPR002885	Pentatricopeptide_repeat	206	230

External Links

No external refs found!