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  5. Sacu_v1.1_s3054.g028586

Sacu_v1.1_s3054.g028586


Description : not classified & original description: CDS=1-480


Gene families : OG0001479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s3054.g028586
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g006585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g039014 No alias not classified & original description: CDS=1-366 0.03 OrthoFinder output from all 47 species
Azfi_s0200.g057539 No alias not classified & original description: CDS=1-480 0.01 OrthoFinder output from all 47 species
Azfi_s0213.g058236 No alias not classified & original description: CDS=1-1527 0.01 OrthoFinder output from all 47 species
Azfi_s0649.g080913 No alias not classified & original description: CDS=1-399 0.02 OrthoFinder output from all 47 species
Azfi_s0861.g090071 No alias not classified & original description: CDS=1-708 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011059 No alias not classified & original description: CDS=1-369 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012939 No alias not classified & original description: CDS=1-561 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014182 No alias not classified & original description: CDS=1-1209 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018163 No alias not classified & original description: CDS=1-234 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018605 No alias not classified & original description: CDS=1-207 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020845 No alias not classified & original description: CDS=1-675 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022742 No alias not classified & original description: CDS=1-243 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022743 No alias not classified & original description: CDS=1-300 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024623 No alias not classified & original description: CDS=1-423 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!