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  5. Sacu_v1.1_s2320.g028304

Sacu_v1.1_s2320.g028304


Description : not classified & original description: CDS=1-1296


Gene families : OG0004504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s2320.g028304
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00017150 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s01224p00002240 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G46560 No alias transducin family protein / WD-40 repeat family protein 0.07 OrthoFinder output from all 47 species
Adi_g010442 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aev_g19704 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g38719 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.37G060800.1 Ceric.37G060800 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Cre04.g223000 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09007 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01027171001 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g24856 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
MA_10437076g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_177408g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g29898 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc01g096110.3.1 Solyc01g096110 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022033 Rav1p_C 274 366
IPR022033 Rav1p_C 96 256
No external refs found!