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  5. Sacu_v1.1_s1075.g027934

Sacu_v1.1_s1075.g027934 (ATFD3, FD3)


Aliases : ATFD3, FD3

Description : ferredoxin targeted to NADP reduction & original description: CDS=1-306


Gene families : OG0000635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s1075.g027934
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT5G10000 ATFD4, FD4 ferredoxin 4 0.03 OrthoFinder output from all 47 species
Aspi01Gene22824.t1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33522.t2 ATFD3, FD3,... ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Cre14.g626700 FD1, ATFD1 Photosynthesis.photophosphorylation.linear electron... 0.02 OrthoFinder output from all 47 species
Dde_g02518 ATFD3, FD3 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Msp_g05813 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pp3c4_8330V3.1 FED A, ATFD2, Pp3c4_8330 2Fe-2S ferredoxin-like superfamily protein 0.02 OrthoFinder output from all 47 species
Tin_g24144 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Zm00001e008212_P001 ATFD3, FD3,... ferredoxin electron carrier 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 23 86
No external refs found!