MA_10430809g0020


Description : RING-HC-class E3 ligase


Gene families : OG_01_0001773 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001773_tree ,
OG_02_0002127 (LandPlants) Phylogenetic Tree(s): OG_02_0002127_tree ,
OG_03_0002842 (SeedPlants) Phylogenetic Tree(s): OG_03_0002842_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430809g0020
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AT1G55250 HUB2 histone mono-ubiquitination 2 0.08 Archaeplastida
Cre14.g625802 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01018223001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.11 Archaeplastida
GSVIVT01025404001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_15023 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Gb_28646 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
LOC_Os04g46450.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
MA_10433679g0010 No alias RING-HC-class E3 ligase 0.08 Archaeplastida
MA_164157g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_18130V3.1 No alias histone mono-ubiquitination 2 0.06 Archaeplastida
Pp3c16_2030V3.1 No alias histone mono-ubiquitination 1 0.04 Archaeplastida
Pp3c25_1490V3.1 No alias histone mono-ubiquitination 1 0.02 Archaeplastida
Pp3c6_18000V3.1 No alias histone mono-ubiquitination 1 0.04 Archaeplastida
Smo175555 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Solyc01g006040.3.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
Zm00001e001968_P003 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Zm00001e013143_P005 No alias RING-HC-class E3 ligase 0.08 Archaeplastida
AT1G55250 HUB2 histone mono-ubiquitination 2 0.05 LandPlants
GSVIVT01018223001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 LandPlants
GSVIVT01025404001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Gb_15023 No alias RING-HC-class E3 ligase 0.02 LandPlants
Gb_28646 No alias RING-HC-class E3 ligase 0.02 LandPlants
Pp3c12_18130V3.1 No alias histone mono-ubiquitination 2 0.04 LandPlants
Pp3c16_2030V3.1 No alias histone mono-ubiquitination 1 0.04 LandPlants
Pp3c6_18000V3.1 No alias histone mono-ubiquitination 1 0.03 LandPlants
Smo175555 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 LandPlants
Solyc01g006040.3.1 No alias RING-HC-class E3 ligase 0.03 LandPlants
Zm00001e001968_P003 No alias RING-HC-class E3 ligase 0.02 LandPlants
Zm00001e013143_P005 No alias RING-HC-class E3 ligase 0.07 LandPlants
AT1G55250 HUB2 histone mono-ubiquitination 2 0.05 SeedPlants
GSVIVT01018223001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 SeedPlants
GSVIVT01025404001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Gb_15023 No alias RING-HC-class E3 ligase 0.02 SeedPlants
Gb_28646 No alias RING-HC-class E3 ligase 0.02 SeedPlants
Solyc01g006040.3.1 No alias RING-HC-class E3 ligase 0.03 SeedPlants
Zm00001e001968_P003 No alias RING-HC-class E3 ligase 0.02 SeedPlants
Zm00001e013143_P005 No alias RING-HC-class E3 ligase 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!