Ehy_g07681

Description : recombinase *(RecA) & original description: none

Gene families : OG0001867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001867_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g07681

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00136000	evm_27.TU.AmTr_v1...	Cell cycle.organelle machineries.DNA replication.genome...	0.02	OrthoFinder output from all 47 species
Aop_g20566	No alias	recombinase *(RecA) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.1Z291900.1	Ceric.1Z291900	recombinase *(RecA) & original description:...	0.02	OrthoFinder output from all 47 species
GSVIVT01020482001	No alias	Cell cycle.organelle machineries.DNA replication.genome...	0.02	OrthoFinder output from all 47 species
LOC_Os01g67510.1	LOC_Os01g67510	recombinase (RecA)	0.02	OrthoFinder output from all 47 species
LOC_Os03g43850.1	LOC_Os03g43850	recombinase (RecA)	0.03	OrthoFinder output from all 47 species
Nbi_g10220	No alias	recombinase *(RecA) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g30155	No alias	recombinase *(RecA) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008844	No alias	recombinase *(RecA) & original description: CDS=236-1495	0.04	OrthoFinder output from all 47 species
Zm00001e028552_P001	Zm00001e028552	recombinase (RecA)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013765	DNA_recomb/repair_RecA	97	360

External Links

No external refs found!

Ehy_g07681

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation