Sacu_v1.1_s0728.g027633 (APUM4, PUM4)

Aliases : APUM4, PUM4

Description : not classified & original description: CDS=1-1200

Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0728.g027633
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
Aop_g30394	PUM1, APUM1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.16G072600.1	PUM1, APUM1,...	not classified & original description: pacid=50589841...	0.04	OrthoFinder output from all 47 species
LOC_Os04g12480.1	APUM4, PUM4,...	Pumilio homolog 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	185	210
IPR001313	Pumilio_RNA-bd_rpt	254	285
IPR001313	Pumilio_RNA-bd_rpt	288	321
IPR001313	Pumilio_RNA-bd_rpt	49	82
IPR001313	Pumilio_RNA-bd_rpt	215	250
IPR001313	Pumilio_RNA-bd_rpt	334	363
IPR001313	Pumilio_RNA-bd_rpt	143	176

External Links

No external refs found!