MA_10430790g0030


Description : component RPL13 of LSU proteome component


Gene families : OG_01_0002427 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002427_tree ,
OG_02_0002444 (LandPlants) Phylogenetic Tree(s): OG_02_0002444_tree ,
OG_03_0003447 (SeedPlants) Phylogenetic Tree(s): OG_03_0003447_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430790g0030
Cluster HCCA: Cluster_471

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00239970 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AMTR_s00029p00111280 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AT3G49010 BBC1, RSU2, ATBBC1 breast basic conserved 1 0.06 Archaeplastida
AT5G23900 No alias Ribosomal protein L13e family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020629.36 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Cre14.g630100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
GSVIVT01027212001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01030767001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
LOC_Os03g37970.1 No alias component RPL13 of LSU proteome component 0.03 Archaeplastida
LOC_Os06g02510.2 No alias component RPL13 of LSU proteome component 0.05 Archaeplastida
Mp1g04920.1 No alias component RPL13 of LSU proteome component 0.04 Archaeplastida
Mp2g19790.1 No alias component RPL13 of LSU proteome component 0.05 Archaeplastida
Pp3c10_7370V3.1 No alias breast basic conserved 1 0.07 Archaeplastida
Pp3c13_15900V3.1 No alias breast basic conserved 1 0.07 Archaeplastida
Pp3c1_26280V3.1 No alias breast basic conserved 1 0.05 Archaeplastida
Pp3c3_21130V3.1 No alias breast basic conserved 1 0.02 Archaeplastida
Smo165483 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Smo266648 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Solyc08g075700.3.1 No alias component RPL13 of LSU proteome component 0.04 Archaeplastida
Solyc12g096150.2.1 No alias component RPL13 of LSU proteome component 0.04 Archaeplastida
Zm00001e018804_P001 No alias component RPL13 of LSU proteome component 0.05 Archaeplastida
Zm00001e028430_P003 No alias component RPL13 of LSU proteome component 0.04 Archaeplastida
Zm00001e031172_P001 No alias component RPL13 of LSU proteome component 0.06 Archaeplastida
AMTR_s00022p00239970 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 LandPlants
AMTR_s00029p00111280 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 LandPlants
AT3G49010 BBC1, RSU2, ATBBC1 breast basic conserved 1 0.06 LandPlants
AT5G23900 No alias Ribosomal protein L13e family protein 0.03 LandPlants
GSVIVT01027212001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 LandPlants
GSVIVT01030767001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 LandPlants
LOC_Os03g37970.1 No alias component RPL13 of LSU proteome component 0.03 LandPlants
LOC_Os06g02510.2 No alias component RPL13 of LSU proteome component 0.05 LandPlants
Mp1g04920.1 No alias component RPL13 of LSU proteome component 0.04 LandPlants
Mp2g19790.1 No alias component RPL13 of LSU proteome component 0.05 LandPlants
Pp3c10_7370V3.1 No alias breast basic conserved 1 0.07 LandPlants
Pp3c13_15900V3.1 No alias breast basic conserved 1 0.07 LandPlants
Smo165483 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 LandPlants
Smo266648 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 LandPlants
Solyc08g075700.3.1 No alias component RPL13 of LSU proteome component 0.04 LandPlants
Solyc12g096150.2.1 No alias component RPL13 of LSU proteome component 0.04 LandPlants
Zm00001e018804_P001 No alias component RPL13 of LSU proteome component 0.04 LandPlants
Zm00001e028430_P003 No alias component RPL13 of LSU proteome component 0.04 LandPlants
Zm00001e031172_P001 No alias component RPL13 of LSU proteome component 0.06 LandPlants
AMTR_s00022p00239970 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 SeedPlants
AMTR_s00029p00111280 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 SeedPlants
AT3G49010 BBC1, RSU2, ATBBC1 breast basic conserved 1 0.06 SeedPlants
AT5G23900 No alias Ribosomal protein L13e family protein 0.03 SeedPlants
GSVIVT01027212001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 SeedPlants
GSVIVT01030767001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 SeedPlants
LOC_Os03g37970.1 No alias component RPL13 of LSU proteome component 0.03 SeedPlants
LOC_Os06g02510.2 No alias component RPL13 of LSU proteome component 0.05 SeedPlants
Solyc08g075700.3.1 No alias component RPL13 of LSU proteome component 0.04 SeedPlants
Solyc12g096150.2.1 No alias component RPL13 of LSU proteome component 0.04 SeedPlants
Zm00001e018804_P001 No alias component RPL13 of LSU proteome component 0.04 SeedPlants
Zm00001e028430_P003 No alias component RPL13 of LSU proteome component 0.03 SeedPlants
Zm00001e031172_P001 No alias component RPL13 of LSU proteome component 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001380 Ribosomal_L13e 45 199
No external refs found!