1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0295.g027183

Sacu_v1.1_s0295.g027183


Description : not classified & original description: CDS=1-1983


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0295.g027183

Target Alias Description ECC score Gene Family Method Actions
Ala_g24699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02986 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g20831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34200.t1 Aspi01Gene34200 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007864 No alias not classified & original description: CDS=1-924 0.05 OrthoFinder output from all 47 species
Cba_g09255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g65712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G003300.1 Ceric.08G003300 not classified & original description: pacid=50638706... 0.05 OrthoFinder output from all 47 species
Ceric.09G067900.1 Ceric.09G067900 not classified & original description: pacid=50588290... 0.03 OrthoFinder output from all 47 species
Ceric.12G065400.1 Ceric.12G065400 not classified & original description: pacid=50601520... 0.03 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.04 OrthoFinder output from all 47 species
Ceric.30G033300.1 Ceric.30G033300 not classified & original description: pacid=50608686... 0.04 OrthoFinder output from all 47 species
Dac_g14051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 345 373
IPR002885 Pentatricopeptide_repeat 556 585
IPR002885 Pentatricopeptide_repeat 136 164
IPR002885 Pentatricopeptide_repeat 233 264
IPR002885 Pentatricopeptide_repeat 267 299
IPR002885 Pentatricopeptide_repeat 587 634
IPR002885 Pentatricopeptide_repeat 377 423
IPR002885 Pentatricopeptide_repeat 166 214
IPR002885 Pentatricopeptide_repeat 447 496
No external refs found!