1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0287.g027148

Sacu_v1.1_s0287.g027148 (ATRABG3C, ATRAB7D, RABG3c)


Aliases : ATRABG3C, ATRAB7D, RABG3c

Description : G-class RAB GTPase & original description: CDS=209-802


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0287.g027148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00072050 AtRABG3d,... Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.02 OrthoFinder output from all 47 species
Adi_g021271 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115862 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000754.29 ATRABG3C, ATRAB7D, RABG3c Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Cre06.g311900 ATRAB7, RABG3E, ATRABG3E Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Dcu_g14494 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01198 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07308 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08054 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10043564g0010 AtRABG3d, RABG3d G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Mp8g13820.1 AtRABG3d, RABG3d G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Pir_g40856 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12607 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP HCCA
MF GO:0061657 UFM1 conjugating enzyme activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 277
IPR002885 Pentatricopeptide_repeat 282 328
IPR002885 Pentatricopeptide_repeat 79 123
IPR002885 Pentatricopeptide_repeat 180 228
IPR001806 Small_GTPase 19 168
No external refs found!