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  5. Sacu_v1.1_s0286.g027146

Sacu_v1.1_s0286.g027146 (MED34, ATRECQ2, RECQL2)


Aliases : MED34, ATRECQ2, RECQL2

Description : not classified & original description: CDS=56-1201


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0286.g027146
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene36086.t1 RecQl3, ATRECQ3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42925.t1 MED34, ATRECQ2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14718 ATRECQ4A, ATSGS1, RECQ4A helicase component *(RecQ4A) of RTR Holliday junction... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 256 362
IPR011545 DEAD/DEAH_box_helicase_dom 115 214
No external refs found!