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  5. Sacu_v1.1_s0273.g027044

Sacu_v1.1_s0273.g027044


Description : night-time repressor *(COR27) & original description: CDS=43-1071


Gene families : OG0001328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0273.g027044

Target Alias Description ECC score Gene Family Method Actions
Als_g60906 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29464 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g08580.1 COR27, LOC_Os03g08580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g25060.1 COR27, LOC_Os10g25060 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g16679 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41302 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06207 COR27 night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09955 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57341 COR27 night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098533 ATPase dependent transmembrane transport complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!