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  5. Sacu_v1.1_s0268.g026991

Sacu_v1.1_s0268.g026991


Description : not classified & original description: CDS=1-2238


Gene families : OG0001186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001186_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0268.g026991

Target Alias Description ECC score Gene Family Method Actions
Adi_g054119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09770.t2 MRB1, ATMRB1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40933.t1 Aspi01Gene40933 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40934.t1 Aspi01Gene40934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40935.t1 Aspi01Gene40935 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G062500.1 Ceric.16G062500 not classified & original description: pacid=50588736... 0.03 OrthoFinder output from all 47 species
GSVIVT01007273001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_35699 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e021907_P001 Zm00001e021907 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 609 644
IPR021924 DUF3537 75 435
No external refs found!