Sacu_v1.1_s0268.g026986


Description : not classified & original description: CDS=193-879


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0268.g026986

Target Alias Description ECC score Gene Family Method Actions
AT3G58000 No alias VQ motif-containing protein 0.04 OrthoFinder output from all 47 species
Aev_g36583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g38883 No alias WRKY33-activating protein *(SIB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12674.t1 Aspi01Gene12674 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24473.t1 Aspi01Gene24473 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46261.t1 Aspi01Gene46261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66306.t1 Aspi01Gene66306 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.04 OrthoFinder output from all 47 species
Ceric.24G005100.1 Ceric.24G005100 not classified & original description: pacid=50628455... 0.02 OrthoFinder output from all 47 species
Dcu_g00487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g57030.1 LOC_Os04g57030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g21582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_158473g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010042 No alias not classified & original description: CDS=1-846 0.04 OrthoFinder output from all 47 species
Sam_g34111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03596 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA

No InterPro domains available for this sequence

No external refs found!