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  5. Sacu_v1.1_s0264.g026925

Sacu_v1.1_s0264.g026925 (emb2738)


Aliases : emb2738

Description : not classified & original description: CDS=87-1838


Gene families : OG0006217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0264.g026925

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00249930 emb2738,... No description available 0.06 OrthoFinder output from all 47 species
AT3G12080 emb2738 GTP-binding family protein 0.07 OrthoFinder output from all 47 species
Adi_g055754 emb2738 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64976.t1 emb2738, Aspi01Gene64976 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G078300.1 emb2738, Ceric.03G078300 not classified & original description: pacid=50572633... 0.03 OrthoFinder output from all 47 species
Cre16.g658450 emb2738 No description available 0.01 OrthoFinder output from all 47 species
Dac_g01675 emb2738 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13342 emb2738 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01437 emb2738 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025275001 emb2738 No description available 0.05 OrthoFinder output from all 47 species
LOC_Os11g41910.1 emb2738, LOC_Os11g41910 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g03840.1 emb2738 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g48494 emb2738 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59771 emb2738 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g065870.3.1 emb2738, Solyc11g065870 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e011327_P001 emb2738, Zm00001e011327 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 67
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 200 221
IPR032859 KH_dom-like 481 562
IPR006073 GTP-bd 91 238
IPR006073 GTP-bd 301 422
No external refs found!