Solyc10g018560.2.1 (Solyc10g018560.2)


Aliases : Solyc10g018560.2

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 2 (GATA2)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g018560.2.1
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT2G45050 GATA2 GATA transcription factor 2 0.05 Gene family
AT4G34680 GATA3 GATA transcription factor 3 0.03 Gene family
GSVIVT01018833001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
GSVIVT01035614001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.06 Gene family
LOC_Os01g54210 Os01g0745700 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os02g43150 Os02g0645600 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os02g56250 Os02g0806300,... 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os05g44400 Os05g0520300 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.06 Gene family
LOC_Os10g40810 Os10g0557600 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc01g090760.3.1 Solyc01g090760.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d012757 GRMZM2G044576 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.08 Gene family
Zm00001d029896 GRMZM2G113098 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d051981 GRMZM2G379005 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 172 205
No external refs found!