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  5. Sacu_v1.1_s0240.g026606

Sacu_v1.1_s0240.g026606


Description : regulatory protein of RNA homeostasis & original description: CDS=215-1792


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0240.g026606

Target Alias Description ECC score Gene Family Method Actions
Aev_g04700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63175 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aob_g01806 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aob_g02256 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Aob_g04427 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22926.t2 Aspi01Gene22926 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0017.g014471 No alias not classified & original description: CDS=103-1737 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025453 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0130.g049031 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.03 OrthoFinder output from all 47 species
Dcu_g17295 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Mp3g23720.1 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g06927 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17330 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Solyc06g072720.3.1 Solyc06g072720 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 184 205
IPR000571 Znf_CCCH 123 147
IPR000571 Znf_CCCH 243 269
No external refs found!