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  5. Sacu_v1.1_s0239.g026595

Sacu_v1.1_s0239.g026595 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: CDS=121-1635


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0239.g026595
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Aev_g13387 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07418 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07123 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06705 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05822 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09473 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g080690.4.1 Solyc08g080690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g068740.2.1 MBD05, MBD5,... methylation reader (MBD5-6) 0.03 OrthoFinder output from all 47 species
Spa_g50004 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 297 348
No external refs found!