1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0235.g026544

Sacu_v1.1_s0235.g026544


Description : TruA-type tRNA pseudouridine synthase & original description: CDS=136-1521


Gene families : OG0006942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006942_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0235.g026544

Target Alias Description ECC score Gene Family Method Actions
Aev_g24567 No alias TruA-type tRNA pseudouridine synthase & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001086.3 No alias RNA processing.RNA... 0.01 OrthoFinder output from all 47 species
Dde_g24789 No alias TruA-type tRNA pseudouridine synthase & original... 0.02 OrthoFinder output from all 47 species
Ore_g18799 No alias TruA-type tRNA pseudouridine synthase & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!