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  5. Sacu_v1.1_s0235.g026539

Sacu_v1.1_s0235.g026539


Description : photosynthetic acclimation MPH2 acclimation factor & original description: CDS=1-714


Gene families : OG0005156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0235.g026539

Target Alias Description ECC score Gene Family Method Actions
AT4G02530 No alias chloroplast thylakoid lumen protein 0.05 OrthoFinder output from all 47 species
Adi_g017251 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Adi_g017252 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Ala_g04007 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Als_g23805 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Aob_g09254 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Aop_g06470 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55410.t1 Aspi01Gene55410 photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010005 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Cba_g06275 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.08 OrthoFinder output from all 47 species
Dac_g10226 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Dde_g10042 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g00658 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.06 OrthoFinder output from all 47 species
GSVIVT01015564001 No alias Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
Gb_39226 No alias photosynthetic acclimation MPH2 acclimation factor 0.05 OrthoFinder output from all 47 species
LOC_Os06g49160.1 LOC_Os06g49160 photosynthetic acclimation MPH2 acclimation factor 0.05 OrthoFinder output from all 47 species
Len_g35740 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.06 OrthoFinder output from all 47 species
Lfl_g12575 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Lfl_g39855 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.02 OrthoFinder output from all 47 species
MA_4765g0010 No alias photosynthetic acclimation MPH2 acclimation factor 0.05 OrthoFinder output from all 47 species
Mp7g01620.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.11 OrthoFinder output from all 47 species
Ore_g37920 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Ore_g45036 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.05 OrthoFinder output from all 47 species
Pir_g00352 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.07 OrthoFinder output from all 47 species
Pnu_g08287 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Ppi_g01764 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.02 OrthoFinder output from all 47 species
Sam_g06075 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Smo412250 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Spa_g00880 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Zm00001e013209_P001 Zm00001e013209 photosynthetic acclimation MPH2 acclimation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!