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  5. Sacu_v1.1_s0233.g026484

Sacu_v1.1_s0233.g026484


Description : component *(DDR) of ISWI chromatin remodeling complex & original description: CDS=84-2495


Gene families : OG0000785 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000785_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0233.g026484

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00096530 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00209930 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G21560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT1G67780 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 protein 0.02 OrthoFinder output from all 47 species
AT2G23530 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 0.03 OrthoFinder output from all 47 species
Ala_g20760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03213 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Aop_g20889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
Aop_g24005 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.07G054500.1 Ceric.07G054500 not classified & original description: pacid=50627528... 0.04 OrthoFinder output from all 47 species
Ceric.23G067000.1 Ceric.23G067000 component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021582.33 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g531350 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09060 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g33884 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Gb_14005 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g09082 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
Lfl_g38243 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Msp_g13607 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g03121 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
Sam_g06325 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Spa_g11908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011227_P001 Zm00001e011227 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 34 133
No external refs found!