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  5. Sacu_v1.1_s0233.g026482

Sacu_v1.1_s0233.g026482 (NIT4, AtNIT4)


Aliases : NIT4, AtNIT4

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: CDS=12-1094


Gene families : OG0003923 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003923_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0233.g026482
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aob_g12316 NIT4, AtNIT4 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001485 NIT4, AtNIT4 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Cba_g00945 NIT4, AtNIT4 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
GSVIVT01022705001 NIT4, AtNIT4 Secondary metabolism.nitrogen-containing secondary... 0.02 OrthoFinder output from all 47 species
Zm00001e015211_P001 NIT4, AtNIT4,... nitrilase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR003010 C-N_Hydrolase 34 312
No external refs found!