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  5. Sacu_v1.1_s0231.g026430

Sacu_v1.1_s0231.g026430 (GCT)


Aliases : GCT

Description : component *(MED13) of kinase module of MEDIATOR transcription co-activator complex & original description: CDS=422-6448


Gene families : OG0005581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0231.g026430

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00198p00028070 GCT,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
AT1G55325 GCT RNA polymerase II transcription mediators 0.09 OrthoFinder output from all 47 species
Ala_g37172 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Aob_g28951 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47629.t1 GCT, Aspi01Gene47629 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0015.g014125 GCT component *(MED13) of kinase module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
Ceric.39G047500.1 GCT, Ceric.39G047500 component *(MED13) of kinase module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Cre02.g080300 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01025465001 GCT RNA biosynthesis.RNA polymerase II-dependent... 0.07 OrthoFinder output from all 47 species
Gb_30550 GCT component MED13 of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
LOC_Os05g37500.1 GCT, LOC_Os05g37500 component MED13 of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Len_g28451 GCT component *(MED13) of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
MA_84527g0010 GCT component MED13 of kinase module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Mp1g01940.1 GCT component MED13 of kinase module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Ore_g36609 GCT component *(MED13) of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ppi_g03289 GCT component *(MED13) of kinase module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Sam_g17992 No alias component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Smo447924 GCT RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Solyc04g039950.4.1 GCT, Solyc04g039950 component MED13 of kinase module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Zm00001e036721_P002 GCT, Zm00001e036721 component MED13 of kinase module of MEDIATOR... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR041285 MID_MedPIWI 1193 1310
IPR041285 MID_MedPIWI 1320 1435
No external refs found!