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  5. Sacu_v1.1_s0228.g026391

Sacu_v1.1_s0228.g026391 (SCRM2, ICE2)


Aliases : SCRM2, ICE2

Description : bHLH-type transcription factor & original description: CDS=197-2155


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0228.g026391
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00085090 evm_27.TU.AmTr_v1... Transcription factor SCREAM2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00170610 ATICE1, ICE1,... External stimuli response.temperature.ICE-CBF cold... 0.03 OrthoFinder output from all 47 species
Ala_g04435 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g17032 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03868.t1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.06 OrthoFinder output from all 47 species
Cba_g75218 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G086600.1 SCRM2, ICE2,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01004405001 bHLH093 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01008637001 ATICE1, ICE1, SCRM External stimuli response.temperature.ICE-CBF cold... 0.03 OrthoFinder output from all 47 species
Gb_30129 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g32100.1 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.04 OrthoFinder output from all 47 species
Len_g04800 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.04 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.04 OrthoFinder output from all 47 species
MA_63506g0010 SCRM2, ICE2 transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001696 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-2049 0.03 OrthoFinder output from all 47 species
Sam_g12143 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118310.4.1 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species
Solyc12g088130.3.1 bHLH093, Solyc12g088130 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g06696 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 405 447
No external refs found!