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  5. Sacu_v1.1_s0227.g026369

Sacu_v1.1_s0227.g026369


Description : not classified & original description: CDS=1-2073


Gene families : OG0002460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0227.g026369
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Ala_g14616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03483.t1 Aspi01Gene03483 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G031900.1 Ceric.12G031900 not classified & original description: pacid=50601347... 0.03 OrthoFinder output from all 47 species
Ceric.33G020900.1 Ceric.33G020900 not classified & original description: pacid=50606614... 0.04 OrthoFinder output from all 47 species
Ppi_g06932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000934 GIL1 not classified & original description: CDS=1-1917 0.02 OrthoFinder output from all 47 species
Tin_g07883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!