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  5. Sacu_v1.1_s0225.g026309

Sacu_v1.1_s0225.g026309


Description : component *(uL13m) of large mitoribosomal-subunit proteome & original description: CDS=1-798


Gene families : OG0007032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007032_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0225.g026309

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00177040 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 20 137
No external refs found!