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  5. Sacu_v1.1_s0223.g026262

Sacu_v1.1_s0223.g026262


Description : not classified & original description: CDS=1-3285


Gene families : OG0001127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0223.g026262
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Adi_g009520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57896.t1 Aspi01Gene57896 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66885.t1 Aspi01Gene66885 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70401.t1 Aspi01Gene70401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G044500.1 Ceric.37G044500 not classified & original description: pacid=50616184... 0.03 OrthoFinder output from all 47 species
GSVIVT01014346001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01017205001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04948 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g08170.1 LOC_Os01g08170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g48640.1 LOC_Os01g48640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g18715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016722_P001 Zm00001e016722 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR021319 DUF2921 65 1041
No external refs found!