MA_10430689g0020


Description : no hits & (original description: none)


Gene families : OG_01_0003285 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003285_tree ,
OG_02_0003755 (LandPlants) Phylogenetic Tree(s): OG_02_0003755_tree ,
OG_03_0004534 (SeedPlants) Phylogenetic Tree(s): OG_03_0004534_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430689g0020
Cluster HCCA: Cluster_446

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.05 Archaeplastida
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AT2G16940 No alias Splicing factor, CC1-like 0.02 Archaeplastida
AT5G09880 No alias Splicing factor, CC1-like 0.07 Archaeplastida
GSVIVT01022281001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 Archaeplastida
GSVIVT01023998001 No alias No description available 0.03 Archaeplastida
LOC_Os03g05830.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g30370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g19710.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Pp3c11_26720V3.1 No alias Splicing factor, CC1-like 0.04 Archaeplastida
Pp3c7_5140V3.1 No alias Splicing factor, CC1-like 0.03 Archaeplastida
Solyc11g005170.2.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e004710_P005 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 LandPlants
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.06 LandPlants
AT5G09880 No alias Splicing factor, CC1-like 0.07 LandPlants
GSVIVT01022281001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 LandPlants
GSVIVT01023998001 No alias No description available 0.02 LandPlants
LOC_Os03g05830.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os10g30370.1 No alias no hits & (original description: none) 0.03 LandPlants
Mp7g19710.1 No alias no hits & (original description: none) 0.08 LandPlants
Pp3c11_26720V3.1 No alias Splicing factor, CC1-like 0.03 LandPlants
Pp3c7_5140V3.1 No alias Splicing factor, CC1-like 0.03 LandPlants
Solyc11g005170.2.1 No alias no hits & (original description: none) 0.06 LandPlants
Zm00001e004710_P005 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e038994_P002 No alias no hits & (original description: none) 0.02 LandPlants
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 SeedPlants
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.04 SeedPlants
AT5G09880 No alias Splicing factor, CC1-like 0.05 SeedPlants
GSVIVT01022281001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.02 SeedPlants
GSVIVT01023998001 No alias No description available 0.02 SeedPlants
LOC_Os03g05830.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os10g30370.1 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc11g005170.2.1 No alias no hits & (original description: none) 0.06 SeedPlants
Zm00001e004710_P005 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e038994_P002 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 297 360
IPR000504 RRM_dom 398 467
IPR029123 RBM39_linker 488 603
No external refs found!