Sacu_v1.1_s0212.g025945 (MRP6, ATMRP6, ABCC8)

Aliases : MRP6, ATMRP6, ABCC8

Description : subfamily ABCC transporter & original description: CDS=1-3888

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0212.g025945

Target	Alias	Description	ECC score	Gene Family Method
Cba_g07486	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38812	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.33G055800.1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description:...	0.05	OrthoFinder output from all 47 species
Cre13.g564900	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
GSVIVT01021589001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Pir_g15997	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e036442_P001	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	446	580
IPR011527	ABC1_TM_dom	105	370
IPR011527	ABC1_TM_dom	702	941
IPR003439	ABC_transporter-like_ATP-bd	1031	1179

External Links

No external refs found!

Sacu_v1.1_s0212.g025945 (MRP6, ATMRP6, ABCC8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation