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  5. Sacu_v1.1_s0211.g025912

Sacu_v1.1_s0211.g025912


Description : not classified & original description: CDS=1-429


Gene families : OG0000078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0211.g025912
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g007833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16583.t1 ORF145A, Aspi01Gene16583 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012305 No alias not classified & original description: CDS=1-501 0.03 OrthoFinder output from all 47 species
Cba_g34299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25647 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g30307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14421 ORF145A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28813 ORF145A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g007003 No alias not classified & original description: CDS=1-540 0.04 OrthoFinder output from all 47 species
Sam_g32663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25605 ORF145A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 99 143
No external refs found!