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  5. Sacu_v1.1_s0207.g025814

Sacu_v1.1_s0207.g025814 (SHM4)


Aliases : SHM4

Description : EC_2.1 transferase transferring one-carbon group & original description: CDS=80-1492


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0207.g025814
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Adi_g081286 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aev_g23906 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g20779 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
MA_730617g0010 AtSHMT3, SHM3 serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
Mp1g09830.1 SHM4 serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species
Smo166496 SHM4 Amino acid metabolism.biosynthesis.serine... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 13 411
No external refs found!