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  5. Sacu_v1.1_s0207.g025790

Sacu_v1.1_s0207.g025790


Description : Trihelix-type transcription factor & original description: CDS=1-924


Gene families : OG0001565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0207.g025790
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Aop_g13385 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23398 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01344 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08805 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 34 124
No external refs found!