Solyc10g017630.2.1 (Solyc10g017630.2)


Aliases : Solyc10g017630.2

Description : No description available


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g017630.2.1
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT4G24540 AGL24 AGAMOUS-like 24 0.05 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.01 Gene family
LOC_Os12g31748 Os12g0501700 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
MA_94049g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Smo113962 PACid_15420129 No description available 0.01 Gene family
Smo69980 PACid_15421122 No description available 0.01 Gene family
Solyc03g114830.3.1 Solyc03g114830.3 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
Solyc06g064840.3.1 Solyc06g064840.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc11g010570.2.1 Solyc11g010570.2 33.99 development.unspecified Encodes a nuclear protein... 0.05 Gene family
Zm00001d018142 GRMZM2G046885 33.99 development.unspecified Encodes a nuclear protein... 0.06 Gene family
Zm00001d021057 GRMZM2G097059 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d044899 GRMZM5G814279 No description available 0.02 Gene family
Zm00001d051465 GRMZM2G003514 27.3.24 RNA.regulation of transcription.MADS box... 0.01 Gene family
Zm00001d052180 GRMZM2G370777 33.99 development.unspecified Encodes a nuclear protein... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 83 172
IPR002100 TF_MADSbox 10 57
No external refs found!