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  5. Sacu_v1.1_s0204.g025686

Sacu_v1.1_s0204.g025686


Description : not classified & original description: CDS=1028-3349


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0204.g025686
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257000 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G41140 No alias Myosin heavy chain-related protein 0.03 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G028700.1 Ceric.29G028700 not classified & original description: pacid=50624610... 0.02 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01016161001 No alias WEB family protein At4g27595, chloroplastic... 0.02 OrthoFinder output from all 47 species
GSVIVT01033709001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g07077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g025830.4.1 Solyc03g025830 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!