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  5. Sacu_v1.1_s0200.g025595

Sacu_v1.1_s0200.g025595


Description : component *(CAP-H2) of condensin II complex & original description: CDS=95-2302


Gene families : OG0007347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0200.g025595
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Als_g15906 No alias component *(CAP-H2) of condensin II complex & original... 0.08 OrthoFinder output from all 47 species
Aop_g06997 No alias component *(CAP-H2) of condensin II complex & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene11298.t1 Aspi01Gene11298 component *(CAP-H2) of condensin II complex & original... 0.14 OrthoFinder output from all 47 species
Ceric.34G040300.1 Ceric.34G040300 component *(CAP-H2) of condensin II complex & original... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.86 No alias Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Cre09.g408900 No alias Cell cycle.mitosis and meiosis.chromatin... 0.05 OrthoFinder output from all 47 species
Dcu_g12251 No alias component *(CAP-H2) of condensin II complex & original... 0.14 OrthoFinder output from all 47 species
Gb_06953 No alias component CAP-H2 of condensin II complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g33360.1 LOC_Os07g33360 component CAP-H2 of condensin II complex 0.1 OrthoFinder output from all 47 species
Len_g09085 No alias component *(CAP-H2) of condensin II complex & original... 0.11 OrthoFinder output from all 47 species
Lfl_g28311 No alias component *(CAP-H2) of condensin II complex & original... 0.09 OrthoFinder output from all 47 species
MA_29739g0010 No alias component CAP-H2 of condensin II complex 0.03 OrthoFinder output from all 47 species
Msp_g14498 No alias component *(CAP-H2) of condensin II complex & original... 0.05 OrthoFinder output from all 47 species
Nbi_g01344 No alias component *(CAP-H2) of condensin II complex & original... 0.15 OrthoFinder output from all 47 species
Sam_g13794 No alias component *(CAP-H2) of condensin II complex & original... 0.14 OrthoFinder output from all 47 species
Smo402556 No alias Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder output from all 47 species
Solyc12g099420.2.1 Solyc12g099420 component CAP-H2 of condensin II complex 0.04 OrthoFinder output from all 47 species
Spa_g50009 No alias component *(CAP-H2) of condensin II complex & original... 0.06 OrthoFinder output from all 47 species
Tin_g11337 No alias component *(CAP-H2) of condensin II complex & original... 0.12 OrthoFinder output from all 47 species
Zm00001e035108_P001 Zm00001e035108 component CAP-H2 of condensin II complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR031737 CNDH2_C 335 625
IPR031719 H2_M 179 238
IPR009378 H2_N 14 96
No external refs found!