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  5. Sacu_v1.1_s0199.g025567

Sacu_v1.1_s0199.g025567


Description : not classified & original description: CDS=203-673


Gene families : OG0000045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0199.g025567
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene66273.t1 ENODL12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09785 UCC1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G064200.1 Ceric.29G064200 not classified & original description: pacid=50625206... 0.04 OrthoFinder output from all 47 species
Ehy_g04256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_130823g0010 No alias Basic blue protein OS=Cucumis sativus... 0.02 OrthoFinder output from all 47 species
Mp2g20980.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g10290.1 AtENODL8, ENODL8 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 627 651
IPR002885 Pentatricopeptide_repeat 124 146
IPR002885 Pentatricopeptide_repeat 746 771
IPR002885 Pentatricopeptide_repeat 657 683
IPR002885 Pentatricopeptide_repeat 221 243
IPR002885 Pentatricopeptide_repeat 555 584
IPR002885 Pentatricopeptide_repeat 352 382
IPR002885 Pentatricopeptide_repeat 324 345
IPR002885 Pentatricopeptide_repeat 151 175
IPR002885 Pentatricopeptide_repeat 451 497
IPR002885 Pentatricopeptide_repeat 248 295
IPR002885 Pentatricopeptide_repeat 839 870
IPR003245 Phytocyanin_dom 39 116
No external refs found!