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  5. Sacu_v1.1_s0198.g025539

Sacu_v1.1_s0198.g025539


Description : solute transporter *(NAT) & original description: CDS=487-2046


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0198.g025539
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00243580 PDE135,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00152120 NAT7, ATNAT7,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Adi_g013110 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38431 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13546 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g012013 ATNAT12, NAT12 solute transporter *(NAT) & original description: CDS=624-3032 0.03 OrthoFinder output from all 47 species
Azfi_s0178.g056185 No alias solute transporter *(NAT) & original description: CDS=323-1726 0.04 OrthoFinder output from all 47 species
Cba_g16647 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G015800.1 Ceric.01G015800 solute transporter *(NAT) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g03939 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g15170.1 LOC_Os09g15170 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Len_g00677 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19983 NAT7, ATNAT7 solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g07270.1 No alias solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Mp8g07280.1 No alias solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Nbi_g05350 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07259 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02988 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06480 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28021 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029011_P005 Zm00001e029011 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006043 NCS2 31 431
No external refs found!