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  5. Sacu_v1.1_s0196.g025488

Sacu_v1.1_s0196.g025488


Description : not classified & original description: CDS=1-507


Gene families : OG0002409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002409_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0196.g025488
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g116231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15640 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g65861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g41336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009235 No alias not classified & original description: CDS=1-270 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010965 No alias not classified & original description: CDS=1-738 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!