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  5. Sacu_v1.1_s0191.g025295

Sacu_v1.1_s0191.g025295


Description : not classified & original description: CDS=1-333


Gene families : OG0000711 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0191.g025295
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene55208.t1 Aspi01Gene55208 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G068900.1 Ceric.03G068900 not classified & original description: pacid=50572983... 0.04 OrthoFinder output from all 47 species
Ceric.12G011900.1 Ceric.12G011900 not classified & original description: pacid=50601988... 0.03 OrthoFinder output from all 47 species
Ceric.12G012000.1 Ceric.12G012000 not classified & original description: pacid=50602402... 0.03 OrthoFinder output from all 47 species
Ceric.37G059900.1 Ceric.37G059900 not classified & original description: pacid=50616696... 0.05 OrthoFinder output from all 47 species
Msp_g34612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46302 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017882 No alias not classified & original description: CDS=351-863 0.04 OrthoFinder output from all 47 species
Smo437973 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011058 Cyanovirin-N 10 106
No external refs found!