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  5. Sacu_v1.1_s0191.g025280

Sacu_v1.1_s0191.g025280


Description : regulatory protein *(CBP60) of systemic acquired resistance & original description: CDS=587-2542


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0191.g025280

Target Alias Description ECC score Gene Family Method Actions
Adi_g074758 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ala_g20189 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Cba_g11357 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ceric.12G041100.1 Ceric.12G041100 regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Dde_g02963 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ehy_g05967 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
LOC_Os01g04280.1 LOC_Os01g04280 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g05644 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
MA_88280g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g15480 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Pir_g29468 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Pnu_g17300 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Solyc03g113980.3.1 Solyc03g113980 Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g119250.4.1 Solyc03g119250 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR046829 Calmod_bind_C 335 397
IPR046831 Calmodulin_bind_N 106 252
IPR046830 Calmod_bind_M 265 330
No external refs found!