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  5. Sacu_v1.1_s0190.g025276

Sacu_v1.1_s0190.g025276 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: CDS=601-3087


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0190.g025276

Target Alias Description ECC score Gene Family Method Actions
Aob_g18418 PUM7, APUM7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000001 PUM7, APUM7 not classified & original description: CDS=1-2403 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 733 767
IPR001313 Pumilio_RNA-bd_rpt 550 582
IPR001313 Pumilio_RNA-bd_rpt 773 791
IPR001313 Pumilio_RNA-bd_rpt 588 618
IPR001313 Pumilio_RNA-bd_rpt 626 655
IPR001313 Pumilio_RNA-bd_rpt 701 716
IPR001313 Pumilio_RNA-bd_rpt 661 695
IPR001313 Pumilio_RNA-bd_rpt 514 548
No external refs found!