Sacu_v1.1_s0190.g025269


Description : not classified & original description: CDS=3-1997


Gene families : OG0001758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001758_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0190.g025269

Target Alias Description ECC score Gene Family Method Actions
AT5G12120 No alias Ubiquitin-associated/translation elongation factor EF1B protein 0.01 OrthoFinder output from all 47 species
Aev_g06735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 156 186
No external refs found!